PRECOG - PREdiction of Clinical Outcomes from Genomic Profiles
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PRECOG Datasets
Meta-Z Analysis
Individual Datasets Analysis
iPRECOG - immune PREdiction of Clinical Outcomes from Genomic Profiles
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iPRECOG signature matrix
iPRECOG meta-Z matrix
iPRECOG cancer-specific immune fractions
About
Please find below old PRECOG (and TCGA) data. New studies may have been added to current tables.
File
Description
Size
Probe-level results (including FDRs) for individual studies/subsets in PRECOG, prior to collapsing to gene symbols. See header of files for details
1.28 GB
Overall survival times and outcomes for studies (0=ALIVE; DEAD=1 for censoring status)
482 KB
Matrix of gene-level Z-scores for individual studies/subset of studies in PRECOG
23.8 MB
Z-score matrix for TCGA RNA-seq datasets ordered by gene the same as the main PRECOG matrix
12.2 MB
Visualize meta-Z analysis across PRECOG
Columns can be sorted by clicking on the cancer name in the table header.
Z-score to P-value
iPRECOG Signature Matrix - LM22
iPRECOG meta-Z matrix
Z-score to P-value
iPRECOG cancer-specific immune fractions
Individual Datasets Analysis
Visualize Z-scores across individual PRECOG datasets
Z-score to P-value
Visualize survival Z-scores across TCGA RNA-Seq datasets
Z-score to P-value
Contact
agentles at stanford dot edu
amnewman at stanford dot edu
cll at stanford dot edu
sylvia dot plevritis at stanford dot edu
arasha at stanford dot edu